MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Nitrosospira multiformis ATCC 25196 plasmid 3

Total Repeats: 93

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_007617	CGCTT	2	10	61	70	0 %	40 %	20 %	40 %	Non-Coding
2	NC_007617	TCA	3	9	88	96	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3	NC_007617	CCG	2	6	196	201	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_007617	CTG	2	6	278	283	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_007617	ACG	2	6	285	290	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_007617	CG	3	6	289	294	0 %	0 %	50 %	50 %	Non-Coding
7	NC_007617	ATC	2	6	324	329	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_007617	CG	3	6	349	354	0 %	0 %	50 %	50 %	Non-Coding
9	NC_007617	TGTT	2	8	421	428	0 %	75 %	25 %	0 %	Non-Coding
10	NC_007617	GGA	2	6	436	441	33.33 %	0 %	66.67 %	0 %	Non-Coding
11	NC_007617	TTA	2	6	602	607	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_007617	TAT	2	6	620	625	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_007617	TAA	2	6	673	678	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_007617	GTA	2	6	680	685	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
15	NC_007617	AT	3	6	687	692	50 %	50 %	0 %	0 %	Non-Coding
16	NC_007617	TAA	2	6	703	708	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_007617	T	7	7	718	724	0 %	100 %	0 %	0 %	Non-Coding
18	NC_007617	T	6	6	727	732	0 %	100 %	0 %	0 %	Non-Coding
19	NC_007617	AC	3	6	812	817	50 %	0 %	0 %	50 %	Non-Coding
20	NC_007617	T	8	8	832	839	0 %	100 %	0 %	0 %	Non-Coding
21	NC_007617	CTG	2	6	845	850	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
22	NC_007617	GAA	2	6	880	885	66.67 %	0 %	33.33 %	0 %	Non-Coding
23	NC_007617	ATC	2	6	1462	1467	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_007617	TGC	2	6	1477	1482	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_007617	CAG	3	9	1493	1501	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
26	NC_007617	GGT	2	6	1503	1508	0 %	33.33 %	66.67 %	0 %	Non-Coding
27	NC_007617	AGC	2	6	2310	2315	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
28	NC_007617	AGC	2	6	2328	2333	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
29	NC_007617	ATTT	2	8	2345	2352	25 %	75 %	0 %	0 %	Non-Coding
30	NC_007617	GCT	2	6	2356	2361	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
31	NC_007617	C	6	6	3057	3062	0 %	0 %	0 %	100 %	Non-Coding
32	NC_007617	AAT	2	6	3082	3087	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_007617	GATA	2	8	3311	3318	50 %	25 %	25 %	0 %	Non-Coding
34	NC_007617	AGC	2	6	3336	3341	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_007617	CAT	2	6	3357	3362	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_007617	GAA	2	6	3373	3378	66.67 %	0 %	33.33 %	0 %	Non-Coding
37	NC_007617	CG	4	8	4831	4838	0 %	0 %	50 %	50 %	Non-Coding
38	NC_007617	T	6	6	4839	4844	0 %	100 %	0 %	0 %	Non-Coding
39	NC_007617	C	6	6	4870	4875	0 %	0 %	0 %	100 %	Non-Coding
40	NC_007617	AGC	2	6	5094	5099	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_007617	AGG	2	6	5252	5257	33.33 %	0 %	66.67 %	0 %	Non-Coding
42	NC_007617	ATCT	2	8	5350	5357	25 %	50 %	0 %	25 %	Non-Coding
43	NC_007617	C	6	6	5464	5469	0 %	0 %	0 %	100 %	Non-Coding
44	NC_007617	AC	3	6	5502	5507	50 %	0 %	0 %	50 %	Non-Coding
45	NC_007617	AGGG	2	8	5525	5532	25 %	0 %	75 %	0 %	Non-Coding
46	NC_007617	GCA	2	6	5606	5611	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
47	NC_007617	CAA	2	6	5616	5621	66.67 %	0 %	0 %	33.33 %	Non-Coding
48	NC_007617	TATT	2	8	5648	5655	25 %	75 %	0 %	0 %	Non-Coding
49	NC_007617	GCA	2	6	5657	5662	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_007617	T	7	7	5692	5698	0 %	100 %	0 %	0 %	Non-Coding
51	NC_007617	AT	3	6	5729	5734	50 %	50 %	0 %	0 %	Non-Coding
52	NC_007617	CCCT	2	8	5766	5773	0 %	25 %	0 %	75 %	Non-Coding
53	NC_007617	CTG	2	6	5811	5816	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
54	NC_007617	CCT	2	6	6257	6262	0 %	33.33 %	0 %	66.67 %	Non-Coding
55	NC_007617	TTG	2	6	6265	6270	0 %	66.67 %	33.33 %	0 %	Non-Coding
56	NC_007617	GCA	2	6	6300	6305	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
57	NC_007617	GC	3	6	6339	6344	0 %	0 %	50 %	50 %	Non-Coding
58	NC_007617	GTT	2	6	6348	6353	0 %	66.67 %	33.33 %	0 %	Non-Coding
59	NC_007617	CAAA	2	8	6426	6433	75 %	0 %	0 %	25 %	Non-Coding
60	NC_007617	TAA	2	6	9089	9094	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_007617	CCG	2	6	9105	9110	0 %	0 %	33.33 %	66.67 %	Non-Coding
62	NC_007617	GCT	2	6	9114	9119	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
63	NC_007617	TTC	2	6	9149	9154	0 %	66.67 %	0 %	33.33 %	Non-Coding
64	NC_007617	TA	3	6	9220	9225	50 %	50 %	0 %	0 %	Non-Coding
65	NC_007617	CTC	2	6	9257	9262	0 %	33.33 %	0 %	66.67 %	Non-Coding
66	NC_007617	TCT	2	6	9265	9270	0 %	66.67 %	0 %	33.33 %	Non-Coding
67	NC_007617	T	7	7	9282	9288	0 %	100 %	0 %	0 %	Non-Coding
68	NC_007617	GTT	2	6	9337	9342	0 %	66.67 %	33.33 %	0 %	Non-Coding
69	NC_007617	TTTTAT	2	12	9387	9398	16.67 %	83.33 %	0 %	0 %	Non-Coding
70	NC_007617	CTGATT	2	12	9471	9482	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
71	NC_007617	CTA	2	6	9490	9495	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
72	NC_007617	GAG	2	6	10223	10228	33.33 %	0 %	66.67 %	0 %	Non-Coding
73	NC_007617	CAGGC	2	10	10505	10514	20 %	0 %	40 %	40 %	Non-Coding
74	NC_007617	AG	4	8	12168	12175	50 %	0 %	50 %	0 %	Non-Coding
75	NC_007617	TCT	2	6	12187	12192	0 %	66.67 %	0 %	33.33 %	Non-Coding
76	NC_007617	CAT	2	6	12229	12234	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
77	NC_007617	T	6	6	12248	12253	0 %	100 %	0 %	0 %	Non-Coding
78	NC_007617	TTCT	2	8	12262	12269	0 %	75 %	0 %	25 %	Non-Coding
79	NC_007617	ATTAAA	2	12	12280	12291	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_007617	TTAT	2	8	12356	12363	25 %	75 %	0 %	0 %	Non-Coding
81	NC_007617	T	6	6	12367	12372	0 %	100 %	0 %	0 %	Non-Coding
82	NC_007617	TTAT	2	8	12389	12396	25 %	75 %	0 %	0 %	Non-Coding
83	NC_007617	CGTTT	2	10	12397	12406	0 %	60 %	20 %	20 %	Non-Coding
84	NC_007617	CCT	2	6	12507	12512	0 %	33.33 %	0 %	66.67 %	Non-Coding
85	NC_007617	GCTGGT	2	12	12513	12524	0 %	33.33 %	50 %	16.67 %	Non-Coding
86	NC_007617	TAA	2	6	12589	12594	66.67 %	33.33 %	0 %	0 %	Non-Coding
87	NC_007617	GGA	2	6	12597	12602	33.33 %	0 %	66.67 %	0 %	Non-Coding
88	NC_007617	ATT	2	6	12609	12614	33.33 %	66.67 %	0 %	0 %	Non-Coding
89	NC_007617	TAA	2	6	13723	13728	66.67 %	33.33 %	0 %	0 %	Non-Coding
90	NC_007617	CGG	2	6	13735	13740	0 %	0 %	66.67 %	33.33 %	Non-Coding
91	NC_007617	TCAT	2	8	13777	13784	25 %	50 %	0 %	25 %	Non-Coding
92	NC_007617	GCT	2	6	14109	14114	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
93	NC_007617	GCT	2	6	14130	14135	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.